BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F10SP1|AL428946
(867 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1804 1697 0.0
>3x_Contig1804
Length = 51183
Score = 1697 bits (855), Expect = 0.0
Identities = 864/867 (99%), Gaps = 1/867 (0%)
Strand = Plus / Minus
Query: 1 gatccatgttccatgatgagaatctatgggatagtgaggtcctacgtcttgaagatctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37667 gatccatgttccatgatgagaatctatgggatagtgaggtcctacgtcttgaagatctgc 37608
Query: 61 tctgaggcgaattggtactttgagagacatagctatctttccgtgttgccaaagagtcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37607 tctgaggcgaattggtactttgagagacatagctatctttccgtgttgccaaagagtcca 37548
Query: 121 atgcttccttatgatagtwattccttaatttctgtagatttacttccctttcttccttca 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 37547 atgcttccttatgatagtaattccttaatttctgtagatttacttccctttcttccttca 37488
Query: 181 taagctccgcggntagcagcaggcgtattcaatgtaggaatataactagtgatataagga 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37487 taagctccgcgg-tagcagcaggcgtattcaatgtaggaatataactagtgatataagga 37429
Query: 241 attggagaaaattgtttgtattgaccatccttattgattgttttgaatgtagatgggacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37428 attggagaaaattgtttgtattgaccatccttattgattgttttgaatgtagatgggacg 37369
Query: 301 tcgttccattcataatttaaatggtaaggttgatcgtttttaatggcacgttcctcagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37368 tcgttccattcataatttaaatggtaaggttgatcgtttttaatggcacgttcctcagat 37309
Query: 361 ggcctgggatcctgactaagaggatcaagagcttccatattgaacgatgaatttggagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37308 ggcctgggatcctgactaagaggatcaagagcttccatattgaacgatgaatttggagct 37249
Query: 421 gacaaactatgcaatagctttatctgaggttccctttattttaaagtttattcgactgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37248 gacaaactatgcaatagctttatctgaggttccctttattttaaagtttattcgactgtt 37189
Query: 481 ccttaattgatttgggggcggattgtaatatttattgttcgtttttctttttgtcttttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37188 ccttaattgatttgggggcggattgtaatatttattgttcgtttttctttttgtcttttg 37129
Query: 541 tttttcaagtgggaatyatttattttgaagggcgtaaggcacggctactgggcaggattt 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37128 tttttcaagtgggaattatttattttgaagggcgtaaggcacggctactgggcaggattt 37069
Query: 601 tgtaatcaaagcagtcataaattgcaggttcttgcaacatacaatgaactccttgtaagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37068 tgtaatcaaagcagtcataaattgcaggttcttgcaacatacaatgaactccttgtaagt 37009
Query: 661 tagttcacaagatagcctgattttggatggtgaataccaatttttttttttttttattga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37008 tagttcacaagatagcctgattttggatggtgaataccaatttttttttttttttattga 36949
Query: 721 attatcaccaactttattgggaagaaaacgaaacggcacaaactaatatagatgctttga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36948 attatcaccaactttattgggaagaaaacgaaacggcacaaactaatatagatgctttga 36889
Query: 781 gatgtacataagaattgaagagtaatatgaaaatataaaaacgaagccttcagtcaaaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36888 gatgtacataagaattgaagagtaatatgaaaatataaaaacgaagccttcagtcaaaag 36829
Query: 841 ctgcgaggcgtgcgaaaggataaggta 867
|||||||||||||||||||||||||||
Sbjct: 36828 ctgcgaggcgtgcgaaaggataaggta 36802
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,711
Number of Sequences: 1807
Number of extensions: 16711
Number of successful extensions: 2279
Number of sequences better than 1.0e-20: 1
length of query: 867
length of database: 10,358,551
effective HSP length: 16
effective length of query: 851
effective length of database: 10,329,639
effective search space: 8790522789
effective search space used: 8790522789
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)